Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929530.1_cds_XP_016476805.1_68594
CDS Infomation

[gene=LOC107798338] [db_xref=GeneID:107798338] [protein=26S proteasome non-ATPase regulatory subunit 4 homolog isoform X2] [protein_id=XP_016476805.1] [location=join(47977..47988,48100..48213,49111..49216,52033..52147,52231..52440,52523..52829,53627..53750,55079..55182,55302..55370,56303..56341)] [gbkey=CDS]
Sequence

ATGGTTCTCGAGGCAACAATGATCTGTATCGACAATTCTGAGTGGATGCGTAATGGAGAT
TATCCGCGCAATCGATTTGAAGCTCAAACTGACGCAGTTAGCTTATTTTGTGGTTCCAAA
ACCCAGTCGAATCCCGAGAATACAGTTGGAGTATTGACCATGGCTGGCAAAGGAGTTCGT
GTATTGGTTACTCCTACCAGCGACCTAGGAAAAATGTTAGCTTGCACGCACGGATTAGAT
ATCGGTGGTGAATTGAATTTGGCTGCTGGAATTCAGGTGGCACAGTTGGCTCTGAAGCAT
CGGCAAAACAAAAAGCAACAGCAGAGGATCATTGTTTTTGCTGGCAGTCCTGTTAAACAG
GACAAGAAGGTCTTGGAGATGATTGGAAGAAAGTTGAAGAAGAATAGCGTAGCTCTTGAT
GTTATTAGTTTTGGTGAGGAAGATGAGGGGAAGACTGAGAAGCTTGAGGCATTAGTCGCT
GCAGTAAACAACAATGATAGCAGTCACATCATCCATATTCCTCCTGGACCTACTGCTCTT
TCTGATGTGCTAATAAGTACTCCTATTTTTACTGGAGATGGTGAGGGCGGGAGTGGATTT
GCTGCAGCAGCTGCTGCGGCTGCTGCTGGTGGAGGGTCTGGCTATGATTTTGGTGTAGAT
CCTAATTTGGATCCTGAACTTGCTCTGGCACTTCGAGTTTCAATGGAGGAGGAAAGGGCT
AGGCAAGAAGCAGCAGCAAAGAAGGCTGCAGAAGAATCTGCACAAGAAAAAGGAGAAATG
CAGTCAACTTCTCAGGATATTACAATGACTGAAAATGTCAGTGCCAGAACATCTGAAACT
GAAAACAAGGCAGCTGATCTAATGGATGATGAGAATGCACTCTTACAGCAAGCACTTGCA
ATGTCGATGGATGATTCTTCCTCTAACATTACCCCAAGAGACACGGACATGTCAGAAGCA
GCTTCTGAAGATCAAGATTTAGCACTAGCTCTTCAATTGTCAGTGCAGGACAATACAAAA
GATGATTCAAACCAGACAGATGTGACTAAACTGTTGGCAGACCAATCATTCGTGTCATCA
ATTCTTGCTTCACTTCCTGGTGTTGATCCAAATGATCCTTCAGTTAAAGAATTACTTGCT
TCCATGCAAGGCCAGTCTGAGAAGGATGAGGACAAGGAGCAGAAAGAGGACAAAAAGTGA

Peptide Sequence

PEP ID

XP_016476805.1
PEP Infomation

PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X2 [Nicotiana tabacum]
Sequence

MVLEATMICIDNSEWMRNGDYPRNRFEAQTDAVSLFCGSKTQSNPENTVGVLTMAGKGVR
VLVTPTSDLGKMLACTHGLDIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKQ
DKKVLEMIGRKLKKNSVALDVISFGEEDEGKTEKLEALVAAVNNNDSSHIIHIPPGPTAL
SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGGSGYDFGVDPNLDPELALALRVSMEEERA
RQEAAAKKAAEESAQEKGEMQSTSQDITMTENVSARTSETENKAADLMDDENALLQQALA
MSMDDSSSNITPRDTDMSEAASEDQDLALALQLSVQDNTKDDSNQTDVTKLLADQSFVSS
ILASLPGVDPNDPSVKELLASMQGQSEKDEDKEQKEDKK

Transcript Sequence

Gene sequence data has not been registered.